Working at virus, prokaryote and eukaryote level
Metatranscriptomics and comparative metagenomics
Integration of taxonomical and functional data
Metagenomics analysis
Taxonomical classification
Functional classification
What can you expect from us
Metagenomics expertise
Our innovative metagenomics pipeline, which complements those of genomics, transcriptomics and epigenomics, is designed to work with both data obtained using shotgun protocols and with selective amplifications (sequencing of 16S, sequencing of 18S, etc.).
The use of our pipeline enables us to obtain a comprehensive and detailed overview of microbiomes of different origins: human health (stomach, skin, etc.), agriculture and environment (land, water, organic waste, etc.). Due to their high effectiveness, a specific overview is obtained of all species with a presence of more than 1% in the sample. The scientific classification to work at higher levels (prokaryotes, eukaryotes and viruses) is automatically integrated with a functional classification.
This method that we use at Sequentia answers the most frequently asked questions posed by scientists working with metagenomics data.
RELATED CLOUD SOFTWARE
GAIA is a highly reliable and versatile metagenomics data analysis software. It performs taxonomic and functional analyses, delivering clear and precise results. GAIA works with Amplicon (16S/18S/ITS), Shotgun and metatranscriptomics data from any type of sample (including human, soil and water microbiomes), any sequencing platform (Illumina, PacBio, Oxford Nanopore), and any type of organism (prokaryotes, eukaryotes and viruses).
GAIA is user-friendly, cloud-based and dynamic. It can be used by anyone, since it doesn’t require any coding skills or computational infrastructure; and enables experimental design, results navigation, real time comparisons, data re-analysis and storage.
GAIA can answer several questions:
- Which species are present in my samples?
- Which gene functions are present in my samples?
- Which species are responsible for a specific function in my samples?
MICK is a digital decision support platform that helps doctors integrate microbiome analysis into clinical practice, to help guide therapeutic decisions and provide targeted prevention to patients.
MICK is designed to help healthcare professionals offer personalized medical advice to patients through microbiome analysis.
- MICK automatically identifies the microorganisms in a sample, analyses key microbiome health status patterns and functionality, and performs an in-depth characterization of identified pathogens
- Monitor patients’ microbiome status over time. Record key aspects of patients’ health. Unlock Global Health Index and Nutrition Index to go deeper into your analysis
- Access a ready-to-use report to easily communicate and share the results with patients online and offline. Customize the report to fit your needs.
Integrated project management
from experiment design to data interpretation
High data privacy and security
Secure your data
Curated output
To quickly reach the scientific goal
Fast production
Quick production of results
Private IT
Private IT infrastructure and cloud systems
Custom workflows
Customise your project
Up-to-date scientific knowledge
We update continuously
Mixed methods
A mixed approach of unique well-referenced and published bioinformatics
