Pure transcriptomics
- De novo transcriptome assembly
- Reference Guided Transcriptome Assembly
- Gene Expression Network Analysis
Annotation
- Functional annotation of genes (GO and metabolic pathways)
- Gene Ontology Enrichment Analysis
- Annotation of lncRNAs, sORFs, cRNAs
RNA-Seq
- Differential expression analysis of genes and transcripts
- Identification of alternative splicing
- Identification of gene fusions and chimeric transcripts
Custom analysis
- Variant calling (SNPs, InDels)
- Integration with Epigenomics and Genomics data
- Any custom analysis
What can you expect from us
Transcriptomics expertise
The study of the set of genes of a genome is a fundamental step in understanding its biological processes and functions. This is now possible thanks to transcriptomics and the new sequencing technologies that allow us to know all of an organism’s genes in detail, in specific conditions and tissues.
At Sequentia, we have pipelines that integrate the latest bioinformatics processes in this field through which we quickly identify genes, transcripts and splicing variants, paying attention to their functions and organisation using molecular networks. Our pipelines are used in both model organisms and new species to which they can incorporate the transcriptome, even if there is no reference genome, or species with partial annotations (Reference Guided Transcriptome Assembly).
On the other hand, the development of new algorithms to reconstruct transcripts has enabled us to create specific pipelines to record and study types of RNA such as lncRNAs, sORFs and cRNAs, in addition to identifying genetic fusions.
By combining the methods we use, we can integrate data from separate research and create software solutions to independently preserve, display and integrate the analyses.
Integrated project management
from experiment design to data interpretation
High data privacy and security
Secure your data
Curated output
To quickly reach the scientific goal
Fast production
Quick production of results
Private IT
Private IT infrastructure and cloud systems
Custom workflows
Customise your project
Up-to-date scientific knowledge
We update continuously
Mixed methods
A mixed approach of unique well-referenced and published bioinformatics
RELATED CLOUD SOFTWARE
AIR, Artificial Intelligence RNAseq, is the most revolutionary software to run transcriptomics experiments.
AIR is fast, secure, intuitive, and will manage your data in real-time.
Thanks to our powerful cloud we created a software able to perform automatic Differential gene expression analysis with the same precision as a human curated one. It will leave you speechless.
AIR can answer several questions:
- Which genes are differentially expressed across my samples?
- Which is the function of the differentially expressed genes across my samples?
- Are my samples characterised by a specific transcriptome expression profile?
