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PROKYTM

WGS-Powered Outbreak Tracking with PROKYTM

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overview

What You'll Get

PROKYTM is an intuitive solution for the comprehensive analysis of bacterial sequencing data, designed for food safety monitoring and outbreak investigations. It delivers critical insights for prevention by rapidly identifying pathogen sources and transmission routes.

Enhanced Pathogen Detection

WGS provides high-resolution data that can detect even minor genetic variations. This is crucial for distinguishing between strains of the same species, identifying serotypes, and tracking the spread of specific pathogens.

Improved Outbreak Response

By quickly genetically characterizing a pathogen, PROKYTM enables the industry and public health officials to respond rapidly to outbreaks, implementing precision interventions to prevent further spread.

Comprehensive Genomic Analysis

Facilitates multilocus sequence typing (MLST) and core genome MLST (cgMLST), enabling detailed epidemiological studies, pathogen evolution tracking over time, and in-depth genomic analysis through single nucleotide polymorphism (SNP) analysis.

Accurate Phylogenetic Reconstruction

Generates phylogenetic trees that illustrate the evolutionary relationships between different strains, providing insights into the origins and transmission pathways of pathogens.

AMR and Virulence Marker Detection

Automatically identifies key genetic markers linked to pathogen virulence, resistance to antibiotics and disinfectants. This information is essential for understanding pathogen risk.

WORKFLOW

How it works

Complex bioinformatics, made simple. In just a few clicks, your analysis runs automatically and your results are ready to explore and download.

1. Quality checking and trimming

2. Assembly and quality control

3. Annotation

4. Serotyping

5. Typing (MLST & cgMLST)

6. SNP Calling

7. Virulence & disinfectants markers detection

8. Phylogenetic tree & distance matrix

why choose PROKYTM

4 reasons why you should work with PROKYTM

Rapid & reliable analysis

Automates steps from raw data to report, including ID, serotyping, MLST, and phylogeny.

Ensuring data quality

Built-in QC ensures accuracy for compliance and risk assessment.

Modularity & customization

Customizable analysis with flexible genome selection and reporting options.

Workflow integration

Easily incorporate WGS for foodborne pathogens and healthcare-associated infections into your services.

Data Security & Privacy

Security and privacy are at the core of our cloud-based bioinformatics platform. We protect all data with strong encryption in transit and at rest, strict access controls, and continuous security monitoring. Our solutions are GDPR-compliant, ensuring lawful and transparent processing.

Publications

PROKYTM featured in scientific research and publications as the bacterial pathogen genomics analysis tool

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A Comprehensive Benchmark of GAIA 3 for 16S rRNA Taxonomic Classification

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Impact of live black soldier fly larvae supplementation on laying hen performance, stress levels and excreta microbiota

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MaterniCode: New Bioinformatic Pipeline to Detect Fetal Aneuploidies and Rearrangements Using Next-Generation Sequencing

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Everything you need, unified in one platform with Sequentia Hub

PROKYTM is powered by Sequentia Hub, a connected ecosystem of bioinformatics solutions. One platform, flexible access to all solutions.

Go to Sequentia Hub

More than a platform

Ready to enhance your analysis with PROKYTM?

User-Friendly

An intuitive platform built for effortless use, even with limited bioinformatics experience.

Interactive Data Visualization

Explore results dynamically with clear, accessible visualizations.

Secure, Scalable Cloud Architecture

No costly IT infrastructure required. Scale seamlessly as your projects grow.

Expert Customer Support

Get specialist guidance whenever you need it.

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Your Questions Answered

Genome assembly

The complexity of genomes (human and non-human), which requires exceptional analytical power.

The heterogeneity and variable quality of omics data, along with the lack of standardized protocols.

The need for robust computational tools to process the sheer volume of data from high-throughput technologies.

The difficulty of translating complex data into applicable results tailored to each stakeholder’s unique needs, which demands the highest level of scientific and technical expertise.

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Speak to a specialist

Leave us your details and one of our specialists will get in touch with you as soon as possible.

By clicking send, you agree to our Privacy Policy. Sequentia Biotech will use your details to respond to your inquiry and manage the ongoing dialogue with you. You can unsubscribe from marketing communications at any time